STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFPComplement factor properdin. (465 aa)    
Predicted Functional Partners:
HMCN2
Uncharacterized protein.
 
      0.900
G3SN78_LOXAF
Uncharacterized protein.
 
      0.899
G3T2J6_LOXAF
Uncharacterized protein.
   
 0.895
C3
Complement C3.
   
 0.895
C4A
Uncharacterized protein.
   
 0.895
G3UN16_LOXAF
Uncharacterized protein.
 
      0.890
TSR3
Probable ribosome biogenesis protein C16orf42 homolog; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.722
CD109
CD109 molecule.
   
 0.680
FKBP6
Peptidylprolyl isomerase.
    
  0.673
C5
Complement C5.
   
 0.652
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.