STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROM1Prominin 1. (781 aa)    
Predicted Functional Partners:
TBX4
T-box transcription factor 4.
      
 0.723
G3SMI1_LOXAF
Uncharacterized protein.
 
    
 0.668
TBX2
T-box transcription factor 2.
      
 0.597
CD34
CD34 molecule.
      
 0.576
NES
Nestin; Belongs to the intermediate filament family.
      
 0.563
CDHR1
Cadherin related family member 1.
    
 
 0.553
CD44
CD44 molecule (Indian blood group).
      
 0.524
CD24
Uncharacterized protein.
      
 0.521
PECAM1
Platelet and endothelial cell adhesion molecule 1.
  
   
 0.517
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
      
 0.515
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.