STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3STG8_LOXAFIg-like domain-containing protein. (129 aa)    
Predicted Functional Partners:
G3TY05_LOXAF
Ig-like domain-containing protein.
    
 0.814
HAVCR2
Hepatitis A virus cellular receptor 2.
     
  0.791
MED7
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery.
     
  0.780
RAC2
Rac family small GTPase 2.
    
  0.656
RAC1
Rac family small GTPase 1.
    
  0.656
G3TBU1_LOXAF
Uncharacterized protein.
      
 0.490
MAL
Mal, T cell differentiation protein.
     
 0.470
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.420
LCN2
Lipocalin 2; Belongs to the calycin superfamily. Lipocalin family.
      
 0.413
SGMS2
Sphingomyelin synthase 2.
      
 0.412
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.