STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM4Tropomyosin 4; Belongs to the tropomyosin family. (284 aa)    
Predicted Functional Partners:
ACTC1
Actin alpha cardiac muscle 1.
   
 0.944
MYL1
Myosin light chain 1.
   
 0.821
TNNT2
Troponin T2, cardiac type.
   
 0.710
TNNT3
Troponin T3, fast skeletal type.
   
 0.710
TNNT1
Troponin T1, slow skeletal type.
   
 0.710
SMIM20
Uncharacterized protein.
   
 0.705
TNNI2
Troponin I2, fast skeletal type.
   
 0.705
TNNI3
Troponin I3, cardiac type.
   
 0.698
TNNI1
Troponin I1, slow skeletal type.
   
 0.682
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.643
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.