STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB8ARAB8A, member RAS oncogene family. (183 aa)    
Predicted Functional Partners:
RAB11A
RAB11A, member RAS oncogene family.
  
0.946
TBC1D1
TBC1 domain family member 1.
    
 0.941
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.920
SLC2A4
Solute carrier family 2 member 4; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.920
RAB3D
RAB3D, member RAS oncogene family.
  
 
0.920
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.918
WDR41
WD repeat domain 41.
     
 0.914
RAB39B
RAB39B, member RAS oncogene family.
  
 
0.913
RAB8B
RAB8B, member RAS oncogene family.
  
  
0.902
RILPL2
Rab interacting lysosomal protein like 2.
   
 
 0.885
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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