STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC20Leucine rich repeat containing 20. (184 aa)    
Predicted Functional Partners:
NPVF
Neuropeptide VF precursor.
   
 0.764
LRRC30
Leucine rich repeat containing 30.
  
   
 0.756
SLITRK6
SLIT and NTRK like family member 6.
      
 0.616
PKHD1L1
PKHD1 like 1.
    
 0.561
PRRG2
Proline rich and Gla domain 2.
      
 0.546
TMEM38A
Transmembrane protein 38A.
   
 
 0.533
ASB8
Ankyrin repeat and SOCS box containing 8.
    
 0.516
ASB12
Ankyrin repeat and SOCS box containing 12.
   
 0.512
LRRC2
Leucine rich repeat containing 2.
  
   
 0.507
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
  
 0.499
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.