Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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USP3Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (520 aa)    
Predicted Functional Partners:
SNAI1
Snail family transcriptional repressor 1.
    
 
 0.784
UBB
Ubiquitin B.
    
 0.755
UBC
Uncharacterized protein.
    
 0.755
TADA3
Transcriptional adaptor 3.
    
 0.693
TAF10
Uncharacterized protein.
    
 0.691
SLC35F1
Solute carrier family 35 member F1.
      
 0.656
TADA2B
Transcriptional adapter.
   
 0.642
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.623
KAT2B
Lysine acetyltransferase 2B.
    
 0.613
KAT2A
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.613
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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