STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TXLNBTaxilin beta. (688 aa)    
Predicted Functional Partners:
TXLNA
Taxilin alpha.
    
   0.856
C1orf122
Chromosome 1 open reading frame 122.
    
   0.796
TMEM236
Transmembrane protein 236.
      
 0.737
PRPF6
Pre-mRNA processing factor 6.
      
 0.724
RNF122
Ring finger protein 122.
      
 0.707
TXLNG
Taxilin gamma.
    
   0.683
STX4
Syntaxin 4.
    
 0.666
STX3
Syntaxin 3; Belongs to the syntaxin family.
    
 0.666
DTNBP1
Uncharacterized protein.
    
   0.665
IGSF5
Uncharacterized protein.
      
 0.642
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.