STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DIMT1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (313 aa)    
Predicted Functional Partners:
TSR1
Bms1-type G domain-containing protein.
   
 
 0.985
BYSL
Bystin like.
   
 
 0.978
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 
 0.962
LTV1
Uncharacterized protein.
   
 
 0.957
PWP2
WD_REPEATS_REGION domain-containing protein.
   
 
 0.952
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.949
RCL1
RNA terminal phosphate cyclase like 1.
   
 
 0.947
WDR43
WD repeat domain 43.
   
   0.937
WDR36
WD repeat domain 36.
   
   0.937
BRIX1
Biogenesis of ribosomes BRX1.
   
  
 0.925
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.