STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX35DEAH-box helicase 35. (702 aa)    
Predicted Functional Partners:
G3TUX7_LOXAF
Uncharacterized protein.
 
 
 
 0.820
CDC40
Cell division cycle 40.
   
 0.819
YJU2
YJU2 splicing factor homolog.
   
 0.781
SLU7
SLU7 homolog, splicing factor.
   
 0.777
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.775
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 0.769
ITSN2
Intersectin 2.
   
  0.761
G3U095_LOXAF
Uncharacterized protein.
   
  0.761
UTP3
UTP3 small subunit processome component.
   
 0.759
PRPF18
SFM domain-containing protein.
   
 0.754
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.