Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL52Mitochondrial ribosomal protein L52. (123 aa)    
Predicted Functional Partners:
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.976
MRPL30
Ribosomal_L30 domain-containing protein.
   
 
 0.971
MRPL55
Uncharacterized protein.
   
 
 0.970
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.969
MRPL51
Mitochondrial ribosomal protein L51.
   
 
 0.963
MRPS30
Mitochondrial ribosomal protein S30.
    
 
 0.961
MRPL1
Mitochondrial ribosomal protein L1.
   
 
 0.960
MRPS18A
Mitochondrial ribosomal protein S18A.
   
 
 0.954
MRPL16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.951
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.949
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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