STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIML1Tripartite motif family like 1. (470 aa)    
Predicted Functional Partners:
OAZ3
Ornithine decarboxylase antizyme 3.
    
 
 0.548
FRG1
FSHD region gene 1.
    
 
 0.498
MTNR1B
Melatonin receptor 1B; Belongs to the G-protein coupled receptor 1 family.
      
 0.482
FANCD2OS
FANCD2 opposite strand.
   
  
 0.449
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 
 0.430
ZSWIM2
Zinc finger SWIM-type containing 2.
    
 0.423
DEDD
Death effector domain containing.
    
 
 0.419
CBY2
Spermatid associated.
   
 0.419
GALNT18
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.415
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.