Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMC7Transmembrane channel-like protein. (704 aa)    
Predicted Functional Partners:
DUS2
Dihydrouridine synthase 2.
   
  
 0.549
COPRS
Coordinator of PRMT5 and differentiation stimulator.
      
 0.512
MBOAT7
Membrane bound O-acyltransferase domain containing 7; Belongs to the membrane-bound acyltransferase family.
 
    
 0.494
COMTD1
Catechol-O-methyltransferase domain containing 1.
      
 0.490
PARL
Uncharacterized protein.
      
 0.485
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
     
 0.444
SYMPK
Symplekin.
   
 0.438
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.422
DISP2
Dispatched RND transporter family member 2.
      
 0.409
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 0.406
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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