STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOMESEomesodermin. (700 aa)    
Predicted Functional Partners:
MIXL1
Mix paired-like homeobox.
   
 0.671
GATA3
GATA binding protein 3.
   
 
 0.621
FOXA2
Forkhead box A2.
   
 0.605
SOX17
SRY-box transcription factor 17.
    
 0.605
CD8A
CD8a molecule.
   
  
 0.602
ELF5
E74 like ETS transcription factor 5.
      
 0.539
CDX2
Caudal type homeobox 2.
    
 
 0.515
TBX19
T-box transcription factor 19.
   
 
0.509
TBXT
T-box transcription factor T.
   
 
0.509
SMAD2
Mothers against decapentaplegic homolog.
   
 0.507
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.