STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITGBL1Integrin subunit beta like 1. (494 aa)    
Predicted Functional Partners:
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
   
 0.769
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.762
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
   
 0.761
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
   
 0.761
G3SN35_LOXAF
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.759
ITGA9
Integrin_alpha2 domain-containing protein.
   
 0.759
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
   
 0.755
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
   
 0.754
ITGA2B
Integrin subunit alpha 2b; Belongs to the integrin alpha chain family.
   
 0.753
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
   
 0.753
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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