STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC3BLeucine rich repeat containing 3B. (259 aa)    
Predicted Functional Partners:
MRVI1
Murine retrovirus integration site 1 homolog.
    
 0.794
COX7A2L
Cytochrome c oxidase subunit 7A2 like.
      
 0.579
DUSP19
Dual specificity phosphatase 19; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
 
 0.578
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
    
 0.561
RYR3
Ryanodine receptor 3.
   
  
 0.552
STOX1
Uncharacterized protein.
      
 0.547
G3UGT8_LOXAF
Stork_head domain-containing protein.
      
 0.547
CBR4
Carbonyl reductase 4.
    
 
 0.537
GASK1B
Golgi associated kinase 1B.
      
 0.519
ROBO2
Roundabout guidance receptor 2.
   
 0.511
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.