STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISYNA1Inositol-3-phosphate synthase 1. (464 aa)    
Predicted Functional Partners:
IMPA1
Inositol-1-monophosphatase.
  
 
 0.925
IMPA2
Inositol-1-monophosphatase.
  
 
 0.925
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
     
 0.921
INPP4B
Inositol polyphosphate-4-phosphatase type II B.
     
 0.897
RBKS
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 0.765
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
    
 0.763
TRAF4
TNF receptor-associated factor.
    
   0.734
NCBP1
Nuclear cap binding protein subunit 1.
      
 0.700
IMPAD1
Inositol monophosphatase domain containing 1.
     
 0.689
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
   0.670
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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