STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX37DEAH-box helicase 37. (1158 aa)    
Predicted Functional Partners:
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 0.910
UTP3
UTP3 small subunit processome component.
   
 0.888
WDR46
WD repeat domain 46.
   
 0.879
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.878
NOC4L
Nucleolar complex associated 4 homolog.
   
 0.852
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.849
DCAF13
DDB1 and CUL4 associated factor 13.
   
  0.847
UTP25
UTP25 small subunit processor component.
   
 0.844
UTP20
UTP20 small subunit processome component.
   
 0.843
NOP14
NOP14 nucleolar protein.
 
 
 0.841
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.