STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM19RNA binding motif protein 19. (843 aa)    
Predicted Functional Partners:
BMS1
BMS1 ribosome biogenesis factor.
   
 
 0.977
PWP2
WD_REPEATS_REGION domain-containing protein.
   
 
 0.974
NOP9
NOP9 nucleolar protein.
   
   0.946
WDR46
WD repeat domain 46.
   
   0.940
HEATR1
U3snoRNP10 domain-containing protein.
   
   0.937
WDR36
WD repeat domain 36.
   
 
 0.930
BYSL
Bystin like.
   
 
 0.930
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.921
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.912
DDX10
RNA helicase.
   
 
 0.907
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.