STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC65Coiled-coil domain containing 65. (496 aa)    
Predicted Functional Partners:
DNAI1
Dynein axonemal intermediate chain 1.
   
 
 0.847
DRC1
Dynein regulatory complex subunit 1.
  
  
0.831
CCDC40
Coiled-coil domain containing 40.
   
 
 0.773
CCDC39
Coiled-coil domain containing 39.
   
 
 0.766
RSPH9
Radial spoke head 9 homolog.
   
  
 0.718
GAS8
Growth arrest specific 8.
    
 
 0.718
DNAI2
Dynein axonemal intermediate chain 2.
   
 
 0.713
LRRC6
Leucine rich repeat containing 6.
   
  
 0.695
ARMC4
Armadillo repeat containing 4.
   
 
 0.689
NME8
NME/NM23 family member 8.
   
 
 0.678
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.