STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARF3ADP ribosylation factor 3; Belongs to the small GTPase superfamily. Arf family. (181 aa)    
Predicted Functional Partners:
CYTH2
Uncharacterized protein.
   
 0.852
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.744
CYTH4
Cytohesin 4.
    
 0.727
COPB1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.716
PEX13
Peroxisomal biogenesis factor 13.
   
  
 0.708
PGM1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
    
 
 0.700
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
   
 0.692
NCKAP1L
NCK associated protein 1 like.
   
 0.690
NCKAP1
NCK associated protein 1.
   
 0.690
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.686
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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