STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL1ELAV-like protein; Belongs to the RRM elav family. (326 aa)    
Predicted Functional Partners:
PRKCD
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.963
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
  
0.936
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.926
CCND1
Cyclin D1; Belongs to the cyclin family.
    
 0.917
DHX9
DExH-box helicase 9.
   
 0.911
CCNA2
Cyclin A2; Belongs to the cyclin family.
   
 0.909
CCNA1
Cyclin A1; Belongs to the cyclin family.
   
 0.905
G3T3J4_LOXAF
RRM domain-containing protein.
   
 0.895
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 
 0.892
TRAF5
TNF receptor-associated factor.
    
 0.890
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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