STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FCER1AFc fragment of IgE receptor Ia. (253 aa)    
Predicted Functional Partners:
SYK
Tyrosine-protein kinase.
   
 0.926
G3UB11_LOXAF
Ig-like domain-containing protein.
    
  0.913
FCER1G
Fc fragment of IgE receptor Ig.
   
 
 0.792
LYN
Tyrosine-protein kinase.
   
 0.593
COL6A3
Collagen type VI alpha 3 chain.
    
 0.525
CMA1
Chymase 1; Belongs to the peptidase S1 family.
   
 0.517
ACKR3
Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.
    
 0.516
SLC45A3
Solute carrier family 45 member 3.
      
 0.516
ACPP
Acid phosphatase, prostate; Belongs to the histidine acid phosphatase family.
    
 
 0.515
CCDC13
Uncharacterized protein.
    
 
 0.514
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.