STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM135BFamily with sequence similarity 135 member B. (1355 aa)    
Predicted Functional Partners:
ZDHHC17
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
   0.765
NXPH2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
  
 0.597
ZDHHC13
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
   0.470
KCTD3
Potassium channel tetramerization domain containing 3.
      
 0.418
C1QTNF4
C1q and TNF related 4.
      
 0.417
VPS35L
VPS35 endosomal protein sorting factor like.
   
  
 0.412
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.