STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB11FIP1FIP-RBD domain-containing protein. (650 aa)    
Predicted Functional Partners:
RAB11A
RAB11A, member RAS oncogene family.
   
 0.978
RAB11B
RAB11B, member RAS oncogene family.
   
 0.978
EHD1
EH domain containing 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.914
RAB11FIP2
RAB11 family interacting protein 2.
    
0.912
RAB11FIP5
Uncharacterized protein.
     
 
0.900
RAB25
RAB25, member RAS oncogene family.
   
 0.851
MYO5B
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.685
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
 
 
 
 0.602
RAB11FIP4
RAB11 family interacting protein 4.
    
 
 0.593
G3TUQ6_LOXAF
FIP-RBD domain-containing protein.
    
 
 0.589
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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