STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3STW9_LOXAFUncharacterized protein. (158 aa)    
Predicted Functional Partners:
EMP1
Epithelial membrane protein 1.
      
 0.619
VSIG4
V-set and immunoglobulin domain containing 4.
   
  
 0.565
COG1
Component of oligomeric golgi complex 1.
    
 
 0.554
TTLL5
Tubulin tyrosine ligase like 5.
      
 0.551
CD44
CD44 molecule (Indian blood group).
   
  
 0.548
CRYL1
Crystallin lambda 1.
      
 0.537
ECI2
Enoyl-CoA delta isomerase 2.
      
 0.505
ATP1B3
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
      
 0.502
GLDC
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
      
 0.498
AMIGO3
Adhesion molecule with Ig like domain 3.
    
 0.494
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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