STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB13EF-hand calcium binding domain 13. (930 aa)    
Predicted Functional Partners:
PHKB
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.
    
 0.707
DDX25
DEAD-box helicase 25.
   
  
 0.703
PPP3R1
Uncharacterized protein.
    
 0.696
LYRM4
Uncharacterized protein; Belongs to the complex I LYR family.
   
   0.681
EFCAB3
EF-hand calcium binding domain 3.
 
  
 
 0.676
CAMK4
Calcium/calmodulin dependent protein kinase IV.
    
 0.655
CNGA2
Cyclic nucleotide gated channel subunit alpha 2.
    
 0.640
GRIN1
ANF_receptor domain-containing protein.
   
 0.639
AK9
Uncharacterized protein.
    
 0.634
G3TCK5_LOXAF
Uncharacterized protein.
    
 0.634
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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