STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB13EF-hand calcium binding domain 13. (930 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.652
GSTO2
Glutathione S-transferase omega 2; Belongs to the GST superfamily.
   
  
 0.642
CAMK2D
Calcium/calmodulin dependent protein kinase II delta.
   
 0.634
CAMK2B
Calcium/calmodulin dependent protein kinase II beta.
   
 0.634
CAMK2A
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.634
DDX25
DEAD-box helicase 25.
      
 0.624
NDUFB5
NADH:ubiquinone oxidoreductase subunit B5.
      
 0.621
KCNQ1
Ion_trans domain-containing protein; Belongs to the potassium channel family.
    
 0.582
ARL17A
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.580
CAMK4
Calcium/calmodulin dependent protein kinase IV.
   
 0.559
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.