Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCOLCE2Procollagen C-endopeptidase enhancer 2. (389 aa)    
Predicted Functional Partners:
AMN
Amnion associated transmembrane protein.
   
 0.633
PRDM5
Zinc finger protein.
      
 0.594
COL22A1
Uncharacterized protein.
    
 0.584
PLS1
Plastin 1.
      
 0.575
MCTP2
Multiple C2 and transmembrane domain containing 2.
      
 0.572
TLL1
Metalloendopeptidase.
   
 0.564
TLL2
Metalloendopeptidase.
   
 0.564
BMP1
Metalloendopeptidase.
   
 0.564
COL23A1
Collagen type XXIII alpha 1 chain.
   
 0.528
IL15RA
Sushi domain-containing protein.
      
 0.509
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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