STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SALL4Spalt like transcription factor 4. (1053 aa)    
Predicted Functional Partners:
NANOG
Homeobox domain-containing protein.
   
 0.985
CRBN
Cereblon.
    
 
 0.965
POU5F1
POU domain protein.
   
 0.939
G3UHL2_LOXAF
POU-specific domain-containing protein.
   
 0.939
ARID4B
AT-rich interaction domain 4B.
   
  
 0.921
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.878
CHD4
Uncharacterized protein.
    
 0.848
USH1C
USH1 protein network component harmonin.
      
 0.837
GATAD2A
GATA zinc finger domain containing 2A.
    
 0.833
SALL1
Spalt like transcription factor 1.
    
 0.830
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.