STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SALL4Spalt like transcription factor 4. (1053 aa)    
Predicted Functional Partners:
NANOG
Homeobox domain-containing protein.
   
 0.936
ARID4B
AT-rich interaction domain 4B.
    
 
 0.860
POU5F1
POU domain protein.
   
 0.794
G3UHL2_LOXAF
POU-specific domain-containing protein.
   
 0.794
USH1C
USH1 protein network component harmonin.
      
 0.716
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.699
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.699
IRX3
Iroquois homeobox 3.
      
 0.673
CRBN
Cereblon.
    
 
 0.664
GPR84
G protein-coupled receptor 84.
      
 0.657
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.