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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRIPTCXXC repeat containing interactor of PDZ3 domain. (101 aa)    
Predicted Functional Partners:
ARMC7
Uncharacterized protein.
    
 
 0.804
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
    
 
 0.800
PHF5A
PHD finger protein 5A.
   
   0.702
SF3B1
Splicing factor 3b subunit 1.
    
   0.690
SF3B2
Splicing factor 3b subunit 2.
    
   0.690
SF3B3
Splicing factor 3b subunit 3.
    
   0.690
RNF113A
Ring finger protein 113A.
    
   0.690
PRPF8
Pre-mRNA processing factor 8.
    
   0.690
DHX16
DEAH-box helicase 16.
    
 
 0.548
RBM48
RNA binding motif protein 48.
   
 
 0.543
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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