STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRIPTCXXC repeat containing interactor of PDZ3 domain. (101 aa)    
Predicted Functional Partners:
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
    
 
 0.913
ARMC7
Uncharacterized protein.
    
 
 0.793
PHF5A
PHD finger protein 5A.
   
   0.770
SF3B1
Splicing factor 3b subunit 1.
    
   0.761
SF3B2
Splicing factor 3b subunit 2.
    
   0.761
SF3B3
Splicing factor 3b subunit 3.
    
   0.761
RNF113A
Ring finger protein 113A.
    
   0.761
PRPF8
Pre-mRNA processing factor 8.
    
   0.761
TMEM247
Transmembrane protein 247.
      
 0.667
CWC15
CWC15 spliceosome associated protein homolog.
   
   0.572
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.