STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWT1PINc domain-containing protein. (588 aa)    
Predicted Functional Partners:
G3TXG1_LOXAF
Uncharacterized protein.
 
      0.900
TRMT1L
tRNA methyltransferase 1 like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
  
 0.582
IVNS1ABP
Influenza virus NS1A binding protein.
      
 0.545
PHTF1
Putative homeodomain transcription factor 1.
    
 
 0.505
PSMC3IP
PSMC3 interacting protein.
      
 0.500
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
      
 0.499
AGTRAP
Angiotensin II receptor associated protein.
      
 0.492
G3STN8_LOXAF
Uncharacterized protein.
      
 0.491
G3T7Y0_LOXAF
Uncharacterized protein.
      
 0.481
GTF2H5
General transcription factor IIH subunit 5.
      
 0.463
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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