STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNDIG1LSynapse differentiation inducing 1 like. (238 aa)    
Predicted Functional Partners:
VRTN
Vertebrae development associated.
      
 0.642
GSG1L
GSG1 like.
      
 0.563
PGGHG
Protein-glucosylgalactosylhydroxylysine glucosidase.
      
 0.544
LIN52
Lin-52 DREAM MuvB core complex component.
      
 0.540
TMEM108
Transmembrane protein 108.
   
  
 0.518
RASD2
RASD family member 2.
      
 0.505
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.505
PROX2
Prospero homeobox 2.
      
 0.500
WDR92
WD repeat domain 92.
      
 0.492
DGKD
Diacylglycerol kinase.
      
 0.490
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.