STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASPNAsporin. (372 aa)    
Predicted Functional Partners:
OGN
Osteoglycin.
   
 
 0.764
MATN3
Matrilin 3.
   
 0.703
FRZB
Frizzled related protein.
   
 0.674
LRR1
Leucine rich repeat protein 1.
  
   
 0.629
CILP
Cartilage intermediate layer protein.
   
  
 0.625
LUM
Lumican.
  
 
0.618
PRELP
Proline and arginine rich end leucine rich repeat protein.
  
 
0.603
CTDSP2
CTD small phosphatase 2.
   
  
 0.599
MB
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
 0.596
FMOD
Fibromodulin.
  
 
0.590
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.