STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IER3IP1Uncharacterized protein. (82 aa)    
Predicted Functional Partners:
WDR26
WD repeat domain 26.
      
 0.602
TMEM167A
Protein kish; Involved in the early part of the secretory pathway.
   
   0.541
YIPF6
Protein YIPF.
      
 0.535
RABAC1
PRA1 family protein.
      
 0.521
YIPF5
Protein YIPF.
   
 
 0.490
YIPF7
Protein YIPF.
   
 
 0.490
SELENOS
Selenoprotein S.
   
 
 0.484
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
    
 
 0.476
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
    
 
 0.476
MRPS21
Mitochondrial ribosomal protein S21.
   
    0.473
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.