STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IER3IP1Uncharacterized protein. (82 aa)    
Predicted Functional Partners:
WDR26
WD repeat domain 26.
      
 0.797
TMEM167A
Protein kish; Involved in the early part of the secretory pathway.
   
 
 0.681
RBM4B
RNA binding motif protein 4B.
      
 0.653
SRRM1
Serine and arginine repetitive matrix 1.
      
 0.646
TMCO1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling; Belongs to the TMCO1 family.
   
  
 0.639
MTMR10
Myotubularin related protein 10.
      
 0.619
YIPF5
Protein YIPF.
   
 
 0.610
YIPF7
Protein YIPF.
   
 
 0.610
PCLO
Piccolo presynaptic cytomatrix protein.
      
 0.591
YIPF6
Protein YIPF.
      
 0.573
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.