STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF2Protein YIPF. (314 aa)    
Predicted Functional Partners:
YIPF4
Protein YIPF.
   
 
 0.698
YIPF6
Protein YIPF.
   
 
 0.664
YIPF5
Protein YIPF.
   
 
 0.550
YIPF7
Protein YIPF.
   
 
 0.550
GIGYF1
GRB10 interacting GYF protein 1.
      
 0.522
YIPF3
Yip1 domain family member 3.
   
  
 0.505
SELENOS
Selenoprotein S.
   
 
 0.495
TVP23C
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.488
TVP23A
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.488
CDRT4
CMT1A duplicated region transcript 4.
   
 
 0.488
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.