STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3SUA0_LOXAFPDZ domain-containing protein. (883 aa)    
Predicted Functional Partners:
FIP1L1
Factor interacting with PAPOLA and CPSF1.
   
 0.899
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.890
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.888
PRMT5
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.887
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.887
SYMPK
Symplekin.
    
 0.887
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.871
RBBP6
RB binding protein 6, ubiquitin ligase.
   
 
 0.798
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.768
PAPOLG
Poly(A) polymerase gamma.
   
 0.768
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.