Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3SUA0_LOXAFPDZ domain-containing protein. (883 aa)    
Predicted Functional Partners:
FIP1L1
Factor interacting with PAPOLA and CPSF1.
   
 0.826
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.808
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.808
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.807
PRMT5
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.804
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.803
SYMPK
Symplekin.
    
 0.803
RBBP6
RB binding protein 6, ubiquitin ligase.
   
 0.803
WDR82
WD repeat domain 82.
   
 0.786
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.699
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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