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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STX6Syntaxin 6; Belongs to the syntaxin family. (256 aa)    
Predicted Functional Partners:
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.958
VAMP4
Vesicle associated membrane protein 4.
    
 0.952
VAMP8
Vesicle associated membrane protein 8.
    
 0.948
STX16-NPEPL1
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.938
SNAP29
Synaptosome associated protein 29.
    
 0.927
STX12
Syntaxin 12; Belongs to the syntaxin family.
    
 0.927
STX5
Syntaxin 5; Belongs to the syntaxin family.
    
 0.907
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
    
 0.904
VPS51
VPS51 subunit of GARP complex.
    
 0.886
NAPB
NSF attachment protein beta.
    
 0.850
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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