STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF14Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
TNFSF14
Tumor necrosis factor ligand 1D; Belongs to the tumor necrosis factor family.
   
 0.996
LTA
Tumor necrosis factor ligand 1E; Belongs to the tumor necrosis factor family.
   
 0.982
BTLA
B and T lymphocyte associated.
   
 0.976
TRAF5
TNF receptor-associated factor.
    
 0.960
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.947
G3TBU1_LOXAF
Uncharacterized protein.
   
 0.786
CD160
CD160 molecule.
    
 
 0.730
ACKR1
Atypical chemokine receptor 1 (Duffy blood group).
      
 0.723
TNFSF11
Tumor necrosis factor ligand 6B; Belongs to the tumor necrosis factor family.
   
 0.700
CD40LG
CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching.
   
 0.693
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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