STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARHL2BarH like homeobox 2. (382 aa)    
Predicted Functional Partners:
PLCB1
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
   
  
 0.645
ZNF503
Zinc finger protein 503.
   
  
 0.600
PTF1A
Pancreas associated transcription factor 1a.
   
 
 0.583
ZNF608
Zinc finger protein 608.
      
 0.576
ZFP36L1
ZFP36 ring finger protein like 1.
    
 
 0.516
PBX3
PBX homeobox 3.
    
 
 0.509
SMYD2
SET and MYND domain containing 2.
    
 
 0.478
EBF2
EBF transcription factor 2.
   
  
 0.478
NOVA2
NOVA alternative splicing regulator 2.
      
 0.464
NFIA
Uncharacterized protein.
    
 
 0.456
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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