Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLP2Proteolipid protein 2. (154 aa)    
Predicted Functional Partners:
PLP1
Proteolipid protein 1.
   
  
 0.888
PDCL2
Phosducin like 2.
      
 0.667
PDC
Phosducin.
      
 0.651
PDCL3
Phosducin like 3.
      
 0.620
PATZ1
POZ/BTB and AT hook containing zinc finger 1.
      
 0.601
CMTM7
CKLF like MARVEL transmembrane domain containing 7.
      
 0.558
TMPRSS2
Transmembrane serine protease 2; Belongs to the peptidase S1 family.
    
 
 0.538
CMTM8
CKLF like MARVEL transmembrane domain containing 8.
      
 0.509
PCBP2
Poly(rC) binding protein 2.
      
 0.506
G3U7J5_LOXAF
Uncharacterized protein.
      
 0.506
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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