STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNDBP1Cyclin D1 binding protein 1. (364 aa)    
Predicted Functional Partners:
TFPT
TCF3 fusion partner.
    
 
 0.793
INO80E
INO80 complex subunit E.
    
  0.780
MCRIP2
MAPK regulated corepressor interacting protein 2.
    
   0.765
TMEM62
Transmembrane protein 62.
 
  
 0.728
RPLP0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
   0.670
G3U8Q8_LOXAF
RL10P_insert domain-containing protein.
   
   0.670
SUOX
Sulfite oxidase.
     
 0.665
CCND1
Cyclin D1; Belongs to the cyclin family.
    
 
 0.649
MRPL55
Uncharacterized protein.
      
 0.627
GRAP2
GRB2 related adaptor protein 2.
    
 
 0.617
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.