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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNDBP1Cyclin D1 binding protein 1. (364 aa)    
Predicted Functional Partners:
GRAP2
GRB2 related adaptor protein 2.
    
 
 0.584
MRPL55
Uncharacterized protein.
      
 0.521
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
 0.509
SYF2
Uncharacterized protein.
    
 
 0.483
G3U6T9_LOXAF
Uncharacterized protein.
    
 
 0.483
WRN
WRN RecQ like helicase.
    
 0.480
BEAN1
Brain expressed associated with NEDD4 1.
      
 0.440
BARD1
BRCA1 associated RING domain 1.
    
 0.411
FDX1
Uncharacterized protein.
  
 0.404
FDX1L
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.404
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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