STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNLSRenalase, FAD dependent amine oxidase. (338 aa)    
Predicted Functional Partners:
NADK
NAD kinase.
     
  0.678
PPOX
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
     
 0.657
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.609
WDR87
Uncharacterized protein.
      
 0.520
NIT1
Nitrilase 1.
      
 0.505
PAOX
Amino_oxidase domain-containing protein.
      
 0.500
MRPS18A
Mitochondrial ribosomal protein S18A.
      
 0.499
SERTAD3
SERTA domain containing 3.
      
 0.499
MFSD6L
Major facilitator superfamily domain containing 6 like.
      
 0.488
MAOA
Amine oxidase.
      
 0.486
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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