Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAE1Ribonucleic acid export 1. (368 aa)    
Predicted Functional Partners:
NUP98
Nucleoporin 98.
   
 0.998
NUP88
Nucleoporin 88.
   
 0.992
NUP214
Nucleoporin 214.
    
 0.984
TPR
Translocated promoter region, nuclear basket protein.
    
 0.978
NUP153
Nucleoporin 153.
    
 0.976
NUP155
Nucleoporin 155.
    
 0.974
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.973
NUP35
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
   
 
 0.972
RANBP2
RAN binding protein 2.
   
 0.963
GLE1
GLE1 RNA export mediator.
   
 0.963
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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