Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LNPKLunapark, ER junction formation factor. (431 aa)    
Predicted Functional Partners:
KLHL12
Kelch like family member 12.
    
 
 0.801
MTX2
Metaxin 2.
      
 0.737
G3U547_LOXAF
Uncharacterized protein.
    
 
 0.701
PDZD8
PDZ domain containing 8.
      
 0.622
EVX2
Even-skipped homeobox 2.
      
 0.602
CUL3
Cullin 3; Belongs to the cullin family.
    
 
 0.557
GOT2
Aspartate aminotransferase.
     
  0.524
GOT1
Aspartate aminotransferase.
     
  0.524
PC
Pyruvate carboxylase.
     
  0.524
FH
Fumarate hydratase.
     
  0.524
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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