CRNKL1 protein (Loxodonta africana) - STRING interaction network

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CRNKL1

Crooked neck pre-mRNA splicing factor 1. (688 aa)

Predicted Functional Partners:

XAB2

0.998

SNW1

0.997

AQR

0.997

RBM22

0.996

G3STH0_LOXAF

0.990

SYF2

0.985

G3U6T9_LOXAF

0.985

ZNF830

0.984

PRPF19

0.977

CWC22

0.972

Your Current Organism:

Loxodonta africana

NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQR	CRNKL1	ENSLAFP00000014822	ENSLAFP00000003764	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Crooked neck pre-mRNA splicing factor 1.	0.997
AQR	CWC22	ENSLAFP00000014822	ENSLAFP00000022939	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	CWC22 spliceosome associated protein homolog.	0.948
AQR	G3STH0_LOXAF	ENSLAFP00000014822	ENSLAFP00000003353	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Uncharacterized protein.	0.989
AQR	G3U6T9_LOXAF	ENSLAFP00000014822	ENSLAFP00000023547	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Uncharacterized protein.	0.815
AQR	PRPF19	ENSLAFP00000014822	ENSLAFP00000002210	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Pre-mRNA processing factor 19.	0.996
AQR	RBM22	ENSLAFP00000014822	ENSLAFP00000005577	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	RNA binding motif protein 22.	0.996
AQR	SNW1	ENSLAFP00000014822	ENSLAFP00000002900	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	SNW domain containing 1.	0.995
AQR	SYF2	ENSLAFP00000014822	ENSLAFP00000017545	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Uncharacterized protein.	0.815
AQR	XAB2	ENSLAFP00000014822	ENSLAFP00000018217	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	XPA binding protein 2.	0.997
AQR	ZNF830	ENSLAFP00000014822	ENSLAFP00000019412	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Zinc finger protein 830.	0.995
CRNKL1	AQR	ENSLAFP00000003764	ENSLAFP00000014822	Crooked neck pre-mRNA splicing factor 1.	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	0.997
CRNKL1	CWC22	ENSLAFP00000003764	ENSLAFP00000022939	Crooked neck pre-mRNA splicing factor 1.	CWC22 spliceosome associated protein homolog.	0.972
CRNKL1	G3STH0_LOXAF	ENSLAFP00000003764	ENSLAFP00000003353	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.990
CRNKL1	G3U6T9_LOXAF	ENSLAFP00000003764	ENSLAFP00000023547	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.985
CRNKL1	PRPF19	ENSLAFP00000003764	ENSLAFP00000002210	Crooked neck pre-mRNA splicing factor 1.	Pre-mRNA processing factor 19.	0.977
CRNKL1	RBM22	ENSLAFP00000003764	ENSLAFP00000005577	Crooked neck pre-mRNA splicing factor 1.	RNA binding motif protein 22.	0.996
CRNKL1	SNW1	ENSLAFP00000003764	ENSLAFP00000002900	Crooked neck pre-mRNA splicing factor 1.	SNW domain containing 1.	0.997
CRNKL1	SYF2	ENSLAFP00000003764	ENSLAFP00000017545	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.985
CRNKL1	XAB2	ENSLAFP00000003764	ENSLAFP00000018217	Crooked neck pre-mRNA splicing factor 1.	XPA binding protein 2.	0.998
CRNKL1	ZNF830	ENSLAFP00000003764	ENSLAFP00000019412	Crooked neck pre-mRNA splicing factor 1.	Zinc finger protein 830.	0.984

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