Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STX1BSyntaxin 1B; Belongs to the syntaxin family. (288 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.993
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.980
STXBP1
Syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.979
VAMP3
V-SNARE coiled-coil homology domain-containing protein.
    
 0.967
VAMP4
Vesicle associated membrane protein 4.
    
 0.957
VAMP1
Vesicle associated membrane protein 1.
   
 0.954
CPLX1
Complexin 1.
   
 0.944
STX4
Syntaxin 4.
  
 
0.909
SNAP29
Synaptosome associated protein 29.
   
 0.907
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
    
 0.906
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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