STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPENSpen family transcriptional repressor. (3666 aa)    
Predicted Functional Partners:
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 
 0.888
NCOR2
Nuclear receptor corepressor 2.
   
 
 0.698
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 
 0.620
WTAP
WT1 associated protein.
    
 
 0.608
NCOR1
Nuclear receptor corepressor 1.
   
 
 0.563
MSX2
Msh homeobox 2.
    
 
 0.540
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 
 0.526
PCGF3
Polycomb group ring finger 3.
      
 0.508
NR1I3
Nuclear receptor subfamily 1 group I member 3.
    
 
 0.470
NR1I2
Nuclear receptor subfamily 1 group I member 2.
    
 
 0.470
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.