STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHISA2Shisa family member 2. (294 aa)    
Predicted Functional Partners:
G3TSG0_LOXAF
Uncharacterized protein.
      
 0.555
CDC42EP5
CDC42 effector protein 5.
      
 0.509
INO80E
INO80 complex subunit E.
      
 0.493
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
      
 0.493
ALKBH4
AlkB homolog 4, lysine demethylase.
      
 0.489
CPSF6
Cleavage and polyadenylation specific factor 6.
      
 0.483
AIFM1
Apoptosis inducing factor mitochondria associated 1.
      
 0.482
FKBP9
Peptidylprolyl isomerase.
      
 0.475
WASF3
WASP family member 3.
      
 0.462
MEX3C
Mex-3 RNA binding family member C.
      
 0.453
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.