STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMAN2Lectin, mannose binding 2. (358 aa)    
Predicted Functional Partners:
TMED2
Transmembrane p24 trafficking protein 2.
   
 0.874
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.840
MVB12B
Multivesicular body subunit 12B.
      
 0.732
TRPM2
Transient receptor potential cation channel subfamily M member 2.
      
 0.703
MCFD2
Multiple coagulation factor deficiency 2.
     
 0.685
MOGS
Mannosyl-oligosaccharide glucosidase.
   
  
 0.674
GOLGA2
Uncharacterized protein.
   
 
 0.658
ERGIC3
ERGIC and golgi 3.
   
 
 0.653
LMAN1
Lectin, mannose binding 1.
   
 0.649
CACNA2D1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 
 0.643
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.