STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FILIP1Filamin A interacting protein 1. (1213 aa)    
Predicted Functional Partners:
ARHGEF12
Rho guanine nucleotide exchange factor 12.
   
 0.664
AHDC1
AT-hook DNA binding motif containing 1.
      
 0.646
FLNC
Filamin C.
    
 
 0.614
STRIP2
Striatin interacting protein 2.
    
   0.582
ZNF521
Zinc finger protein 521.
    
 0.575
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
 
    
 0.565
NSMF
NMDA receptor synaptonuclear signaling and neuronal migration factor.
      
 0.553
JARID2
Jumonji and AT-rich interaction domain containing 2.
      
 0.551
PDCD10
Programmed cell death 10.
    
   0.505
BRCA2
BRCA2 DNA repair associated.
      
 0.494
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.